Fitness data for ABZR87_RS05165 in Ralstonia sp. UNC404CL21Col

sigma-70 family RNA polymerase sigma factor
SEED: sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
rhizosphere rhizosphere sample 4; outgrowth in LB -0.5 -2.5 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.5 -2.1 compare
rhizosphere rhizosphere sample 5; outgrowth in LB -0.5 -2.5 compare
soil soil sample 8; outgrowth in LB -0.4 -2.2 compare
root root sample 6; outgrowth in LB -0.4 -2.0 compare
soil soil sample 1; outgrowth in LB -0.4 -2.7 compare
soil soil EcoFAB sample 2; outgrowth in LB -0.4 -2.0 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.4 -2.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +1.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +2.3 compare
nitrogen source nitrogen source nitrate 5mM +0.4 +2.1 compare
carbon source Azelaic (C) +0.5 +2.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +2.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +2.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +2.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 +3.0 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 +3.7 compare
carbon source Octanoic (C) +0.7 +2.5 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.8 +2.8 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.8 +2.7 compare