Fitness data for ABZR87_RS04980 in Ralstonia sp. UNC404CL21Col

LysM peptidoglycan-binding domain-containing protein
SEED: Uncharacterized protein with LysM domain, COG1652

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Octanoic (C) -0.8 -3.1 compare
root root sample 5; outgrowth in LB -0.7 -2.7 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -3.0 compare
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.5 -3.3 compare
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.4 -3.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -2.4 compare
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.4 -3.1 compare
rhizosphere rhizosphere sample 3; outgrowth in LB +0.4 +1.8 compare
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.4 +2.6 compare
phage Ra3_0.01 +0.6 +4.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.9 +2.4 compare
soil soil EcoFAB sample 1; outgrowth in LB +0.9 +5.8 compare
soil soil EcoFAB sample 2; outgrowth in LB +1.1 +6.7 compare
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +1.2 +8.7 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +1.4 +9.9 compare
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +1.8 +13.6 compare
phage Ra1_0.01 +2.1 +17.0 compare
phage Ra3_0.1 +2.5 +21.4 compare
phage Ra3_1 +6.1 +50.8 compare
phage Ra1_0.1 +6.3 +53.4 compare