Fitness data for ABZR87_RS03040 in Ralstonia sp. UNC404CL21Col

carbohydrate ABC transporter permease
SEED: Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3)
KEGG: multiple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


Add gene:

Or see all 129 experiments or choose conditions

group condition fitness t score  
carbon source Glycerol (C) -1.9 -6.0 compare
carbon source Glycerol (C) -1.7 -5.9 compare
rhizosphere rhizosphere sample 4; outgrowth in LB -0.4 -2.9 compare
root root sample 5; outgrowth in LB -0.4 -2.0 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.3 -1.8 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -1.6 compare
soil soil sample 2; outgrowth in LB -0.3 -2.4 compare
carbon source Dodecandioic (C) -0.3 -2.1 compare
rhizosphere rhizosphere sample 5; outgrowth in LB -0.3 -2.2 compare
carbon source Heptanoic (C) -0.3 -1.9 compare
carbon source Protocatechuic Acid (C) -0.3 -1.8 compare
carbon source D-Glucose (C) -0.3 -2.2 compare
carbon source Lauric (C) -0.3 -1.9 compare
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.3 -1.8 compare
carbon source Sebacic (C) -0.2 -1.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.2 -1.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -1.5 compare
root root sample 4; outgrowth in LB +0.2 +1.2 compare
carbon source Azelaic (C) +0.2 +1.2 compare
carbon source Octanoic (C) +0.3 +1.1 compare