Fitness data for ABZR87_RS01745 in Ralstonia sp. UNC404CL21Col

1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
SEED: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD
KEGG: AmpD protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.7)


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group condition fitness t score  
soil soil EcoFAB sample 1; outgrowth in LB -5.8 -3.4 compare
soil soil EcoFAB sample 2; outgrowth in LB -5.0 -6.0 compare
root root EcoFAB sample 1; outgrowth in LB -4.6 -5.5 compare
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -4.6 -5.0 compare
root root EcoFAB sample 2; outgrowth in LB -4.1 -4.9 compare
carbon source Octanoic (C) -3.9 -3.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -3.6 -3.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -3.6 -5.4 compare
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -3.5 -4.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -3.3 -2.3 compare
carbon source Heptanoic (C) -3.3 -4.7 compare
carbon source Heptanoic (C) -3.1 -4.5 compare
carbon source Octanoic (C) -2.7 -3.2 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.5 -3.6 compare
carbon source Disodium Glutarate (C) -2.4 -3.2 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.1 -4.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.0 -4.8 compare
micoeukaryotes C.elegans, mixed culture-2 -1.8 -2.5 compare
carbon source Hexanoic (C) -1.7 -3.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.7 -3.3 compare