Fitness data for ABZR87_RS00795 in Ralstonia sp. UNC404CL21Col

site-specific tyrosine recombinase XerD
SEED: Tyrosine recombinase XerD
KEGG: integrase/recombinase XerD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -3.4 -2.3 compare
soil soil sample 4; outgrowth in LB -3.1 -2.1 compare
soil soil EcoFAB sample 1; outgrowth in LB -3.1 -2.0 compare
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -2.9 -3.4 compare
no_plant_soil no_plant_soil sample 2; outgrowth in LB -2.9 -3.9 compare
carbon source Sebacic (C) -2.8 -5.5 compare
root root EcoFAB sample 2; outgrowth in LB -2.4 -1.7 compare
soil soil sample 6; outgrowth in LB -2.4 -3.6 compare
soil soil EcoFAB sample 2; outgrowth in LB -2.3 -3.6 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.3 -1.6 compare
no_plant_soil no_plant_soil sample 3; outgrowth in LB -2.2 -4.0 compare
soil soil sample 1; outgrowth in LB -2.1 -3.2 compare
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -2.1 -2.5 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.1 -1.4 compare
carbon source 4-Hydroxybenzoic Acid (C) -2.0 -3.0 compare
no_plant_soil no_plant_soil sample 1; outgrowth in LB -2.0 -3.8 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.0 -1.9 compare
soil soil sample 5; outgrowth in LB -2.0 -3.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.9 -2.2 compare
soil soil sample 9; outgrowth in LB -1.9 -3.4 compare