Fitness data for ABZR87_RS00225 in Ralstonia sp. UNC404CL21Col

ABC transporter substrate-binding protein
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -2.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -2.1 compare
carbon source Octanoic (C) -0.3 -1.3 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -1.2 compare
rhizosphere rhizosphere sample 3; outgrowth in LB -0.2 -1.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.2 -1.3 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.2 -1.4 compare
root root EcoFAB sample 2; outgrowth in LB -0.2 -0.9 compare
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.2 -1.2 compare
control NoPredeControl -0.2 -1.4 compare
carbon source Protocatechuic Acid (C) +0.2 +1.2 compare
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.2 +1.2 compare
carbon source 4-Hydroxybenzoic Acid (C) +0.2 +0.9 compare
carbon source Lauric (C) +0.2 +1.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.8 compare
rhizosphere rhizosphere sample 5; outgrowth in LB +0.2 +1.5 compare
carbon source Trans-2-methyl-2-butenoic (C) +0.2 +1.5 compare
soil soil EcoFAB sample 2; outgrowth in LB +0.2 +1.2 compare
root root sample 5; outgrowth in LB +0.3 +1.6 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.7 compare