Fitness data for ABIE53_006510 in Paraburkholderia graminis OAS925

2-dehydro-3-deoxyglucarate aldolase
SEED: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
KEGG: 2-dehydro-3-deoxyglucarate aldolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -1.2 -3.8 compare
carbon source D-Galacturonic Acid (C) -0.9 -2.9 compare
carbon source Glucuronamide (C) -0.8 -2.7 compare
carbon source Glucuronamide (C) -0.7 -2.4 compare
stress RCH2_defined_glucose_5mM with Adenine 2 mM -0.7 -2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.6 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.1 compare
stress RCH2_defined_glucose_5mM with Adenine 5 mM -0.6 -2.3 compare
stress M9 with Propan-1-ol 13 g/L -0.6 -2.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -2.1 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut +0.5 +2.7 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +1.9 compare
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +0.5 +2.0 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut +0.5 +2.1 compare
stress R2A with N-(3-oxohexanoyl)-DL-homoserine lactone 10 uM +0.6 +2.4 compare
stress R2A with p-Coumaric 0.5 mM +0.6 +2.6 compare
carbon source Cinnamic and Ethanols +0.6 +2.5 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.7 +1.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +1.7 compare