Fitness data for ABIE53_005228 in Paraburkholderia graminis OAS925

5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
SEED: 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
KEGG: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
stress R2A with Tricalcium phosphate 0.5 g/L -1.9 -3.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=potting_mix; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.5 -3.7 compare
stress RCH2_defined_glucose_5mM with Adenine 5 mM -1.5 -4.2 compare
carbon source D-Glucose-6-Phosphate (C) -1.4 -3.0 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -2.8 compare
carbon source D-Cellobiose (C) -1.0 -3.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -2.2 compare
nitrogen source histamine 2mM N source -1.0 -2.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.0 -3.6 compare
carbon source D-Glucosamine Hydrochloride (C) -1.0 -2.4 compare
carbon source Acetylated xylan 10 g/L (C) -1.0 -1.6 compare
stress RCH2_defined_glucose_5mM with Abietic Acid 5 mM -0.9 -2.2 compare
stress RCH2_defined_glucose_5mM with Adenine 5 mM -0.9 -3.1 compare
carbon source Acetylated xylan 10 g/L (C) -0.9 -1.6 compare
stress RCH2_defined_glucose_5mM with Sucrose 5 mM -0.9 -1.6 compare
carbon source D-Gluconic Acid (C) -0.8 -2.1 compare
carbon source Laminarin 10 g/L (C) -0.8 -2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.9 +2.9 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 +2.0 compare
stress R2A with limonene +1.0 +2.2 compare