Fitness data for ABIE53_005227 in Paraburkholderia graminis OAS925

5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
SEED: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60)
KEGG: 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.5 -3.0 compare
carbon source Laminarin 10 g/L (C) -1.3 -2.9 compare
carbon source L-Alanine (C) -1.3 -2.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.3 -3.0 compare
r2a outgrowth control R2A outgrowth control -1.1 -2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.0 -2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -2.1 compare
carbon source Shikimic Acid 5 mM (C) -0.9 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -1.5 compare
stress R2A with Clay 500 g/L -0.9 -2.4 compare
carbon source 4-Hydroxybenzoic Acid (C) -0.9 -2.6 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.8 -1.8 compare
carbon source Adenosine (C) +0.8 +2.9 compare
stress M9 with 3-methyl-2-butenol 2 g/L +0.8 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +1.7 compare
soil extract Adenine 5 mM in soil extract +0.8 +3.7 compare
carbon source Epiandrosterone and Ethanols +0.9 +2.9 compare
carbon source butyrate (C) +0.9 +2.8 compare
stress R2A with Isopropyl alcohol 21 g/L +1.0 +2.4 compare
stress Growth in presence of limonene +1.3 +4.7 compare