Fitness data for ABIE53_004025 in Paraburkholderia graminis OAS925

GntR family transcriptional regulator of vanillate catabolism
SEED: predicted biotin regulatory protein BioR (GntR family)
KEGG: GntR family transcriptional regulator, vanillate catabolism transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.4 -3.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.9 -2.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.7 -2.7 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.5 -2.3 compare
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.4 -1.9 compare
stress M9 with Chloride 200 mM -1.4 -2.1 compare
plant outgrowth control Plant outgrowth control -1.4 -1.7 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 -1.7 compare
stress R2A with Chloride 200 mM -1.3 -1.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 -1.8 compare
carbon source Azelaic 20 mM (C) -1.3 -3.6 compare
r2a no shaking R2A no shaking -1.2 -2.3 compare
carbon source Beta-Lactose (C) -1.2 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -1.9 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.2 -1.7 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -1.1 -1.9 compare
carbon source butyrate (C) -1.1 -2.2 compare
stress R2A with Quartz_sand 500 g/L -1.1 -1.9 compare
carbon source D-Galactose (C) -1.1 -1.9 compare
carbon source Shikimic Acid 5 mM (C) -1.0 -1.5 compare