Fitness data for ABIE53_003951 in Paraburkholderia graminis OAS925

dipeptide transport system substrate-binding protein
SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.8 -3.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -3.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.6 compare
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -0.6 -2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -1.9 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 -1.9 compare
carbon source D-Glucuronic Acid (C) -0.5 -2.5 compare
carbon source 2,3-dihydroxybenzoic and Ethanols -0.5 -2.6 compare
stress R2A with Propan-1-ol 13 g/L -0.5 -1.7 compare
carbon source L-Histidine (C) -0.5 -2.1 compare
carbon source Indole-3-pyruvic and Ethanols -0.5 -2.5 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -1.9 compare
carbon source D-Gluconic Acid (C) -0.5 -1.9 compare
stress R2A with N-decanoyl-DL-Homoserine lactone 10 uM +0.5 +2.4 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut +0.5 +2.0 compare
stress M9 with Propan-1-ol 13 g/L +0.5 +2.7 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +0.6 +2.6 compare
mixed community Mixed culture; Alteromonas stellipolaris PQQ42 1:1 starting OD to Burkholderia +0.6 +4.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 +1.7 compare