Fitness data for ABIE53_003359 in Paraburkholderia graminis OAS925

Cys-tRNA(Pro) deacylase
SEED: Transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source L-Tryptophan (C) -0.7 -3.7 compare
carbon source 2-Deoxy-D-Ribose (C) -0.7 -4.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -2.3 compare
carbon source D-Fructose (C) -0.4 -2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -2.2 compare
phage Burk2_1 -0.4 -2.4 compare
soil extract Abietic Acid 5 mM in soil extract -0.4 -2.4 compare
carbon source Beta-Lactose (C) -0.4 -2.2 compare
mixed community Mixed culture; Alteromonas stellipolaris PQQ42 1:1 starting OD to Burkholderia -0.4 -2.3 compare
carbon source L-Histidine (C) -0.3 -1.9 compare
stress M9 with Ethanol 2.5 vol% -0.3 -2.3 compare
stress M9 with Chloride 200 mM +0.3 +2.0 compare
carbon source Azelaic 20 mM (C) +0.3 +1.9 compare
stress RCH2_defined_glucose_5mM with caffeic 1 mM +0.3 +2.0 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +1.7 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.6 compare
plant outgrowth control Plant outgrowth control +0.5 +2.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.3 compare