Fitness data for ABIE53_003297 in Paraburkholderia graminis OAS925

16S rRNA (cytosine967-C5)-methyltransferase
SEED: Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase B

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -3.3 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.3 compare
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -0.7 -3.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -2.2 compare
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -0.6 -2.4 compare
soil extract Indole-3-pyruvic 5 mM in soil extract +0.5 +1.8 compare
carbon source Cinnamic and Ethanols +0.5 +3.0 compare
stress RCH2_defined_glucose_5mM with Chlorogenic 0.5 mM +0.5 +3.0 compare
carbon source Trisodium citrate (C) +0.5 +2.6 compare
nitrogen source histamine 2mM N source +0.5 +2.3 compare
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM +0.5 +2.9 compare
carbon source shik 5mM +0.5 +3.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.4 compare
carbon source Shikimic Acid 5 mM (C) +0.6 +2.8 compare
carbon source succinate (C) +0.6 +3.0 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.6 +2.1 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.7 +2.5 compare
carbon source Acetylated xylan 10 g/L (C) +0.7 +3.3 compare