Fitness data for ABIE53_002425 in Paraburkholderia graminis OAS925

RNA polymerase sigma-70 factor (ECF subfamily)
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress M9 with 3-methyl-2-butenol 2 g/L -0.6 -2.8 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 -2.2 compare
stress M9 with 3-methyl-2-butenol 2 g/L -0.5 -2.6 compare
nitrogen source histamine 5mM N source +0.4 +2.5 compare
carbon source D-Galactose (C) +0.4 +2.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.0 compare
carbon source D-Glucose-6-Phosphate (C) +0.5 +1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.2 compare
plant outgrowth control Plant outgrowth control +0.5 +2.7 compare
carbon source D-Galacturonic Acid (C) +0.5 +2.3 compare
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.6 compare
carbon source L-Proline (C) +0.5 +2.6 compare
carbon source D-Glucuronic Acid (C) +0.5 +2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=potting_mix; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.1 compare
carbon source D-Fructose (C) +0.5 +1.9 compare
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=potting_mix; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.6 +2.0 compare
carbon source D-Sorbitol (C) +0.6 +2.3 compare
carbon source L-Histidine (C) +0.7 +2.4 compare