Fitness data for ABIE53_001846 in Paraburkholderia graminis OAS925

TetR/AcrR family transcriptional repressor of nem operon

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.4)


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group condition fitness t score  
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -3.3 -5.5 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -3.2 -3.2 compare
stress RCH2_defined_glucose_5mM with Adenine 4 mM -3.1 -4.8 compare
carbon source butyrate (C) -2.8 -4.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.8 -3.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.7 -4.8 compare
carbon source D-Lactate (C) -2.6 -3.6 compare
carbon source D-Mannose (C) -2.6 -3.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.5 -4.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -2.5 -3.9 compare
stress RCH2_defined_glucose_5mM with Adenine 4 mM -2.5 -4.2 compare
carbon source Beta-Lactose (C) -2.5 -5.1 compare
carbon source D-Cellobiose (C) -2.5 -6.2 compare
carbon source L-Tryptophan (C) -2.4 -4.6 compare
stress RCH2_defined_glucose_5mM with Adenine 2 mM -2.4 -4.3 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -2.4 -3.0 compare
plant outgrowth control Plant outgrowth control +2.6 +8.9 compare
r2a outgrowth control R2A outgrowth control +3.1 +18.7 compare
plant outgrowth control Plant outgrowth control +4.0 +20.3 compare
plant outgrowth control Plant outgrowth control +5.0 +20.3 compare