Fitness data for ABIE53_001719 in Paraburkholderia graminis OAS925

LysR family transcriptional regulator (chromosome initiation inhibitor)
SEED: FIG000557: hypothetical protein co-occurring with RecR
KEGG: LysR family transcriptional regulator, chromosome initiation inhibitor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.3 -3.2 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.3 -3.0 compare
carbon source butyrate (C) -1.2 -1.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.2 -1.7 compare
stress R2A with Chloride 200 mM -1.1 -2.1 compare
carbon source L-Tryptophan (C) -1.0 -2.2 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM +1.0 +2.6 compare
m9 no stress control M9 no stress control +1.0 +2.9 compare
carbon source Citric Acid 20 mM (C) +1.0 +4.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +1.1 +2.6 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 +2.2 compare
stress R2A with N-decanoyl-DL-Homoserine lactone 10 uM +1.1 +2.5 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut +1.1 +2.6 compare
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut +1.2 +2.8 compare
stress R2A with N-decanoyl-DL-Homoserine lactone 10 uM +1.2 +2.3 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +1.2 +3.0 compare
stress R2A with Clay 500 g/L +1.2 +2.6 compare
soil extract Indole-3-pyruvic 5 mM in soil extract +1.2 +2.0 compare
stress R2A with N-(3-oxohexanoyl)-DL-homoserine lactone 10 uM +1.3 +2.6 compare
mixed community Mixed culture; Alteromonas stellipolaris PQQ42 1:1 starting OD to Burkholderia +1.3 +3.7 compare