Fitness data for ABIE53_000977 in Paraburkholderia graminis OAS925

3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
SEED: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil extract Serotonin 5 mM in soil extract -0.4 -1.9 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 -1.6 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 -1.7 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -0.4 -1.8 compare
carbon source Shikimic Acid 5 mM (C) +0.4 +2.2 compare
carbon source L-Arginine (C) +0.4 +2.4 compare
carbon source D,L-Malic Acid (C) +0.4 +1.7 compare
stress RCH2_defined_glucose_5mM with Lumichrome 5 mM +0.4 +2.3 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.4 +1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.1 compare
soil extract D,L-Malic Acid 5 mM in soil extract +0.4 +2.5 compare
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM +0.4 +2.3 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.0 compare
stress RCH2_defined_glucose_5mM with Adenine 4 mM +0.4 +2.1 compare
stress RCH2_defined_glucose_5mM with Epiandrosterone 5 mM +0.4 +2.7 compare
carbon source D-Galacturonic Acid (C) +0.4 +2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.6 +2.2 compare
carbon source Acetylated xylan 10 g/L (C) +0.6 +3.3 compare