Fitness data for ABIE53_000425 in Paraburkholderia graminis OAS925

23S rRNA (cytosine1962-C5)-methyltransferase
SEED: LSU m5C1962 methyltransferase RlmI
KEGG: ribosomal RNA large subunit methyltransferase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.7 -3.2 compare
carbon source D-Fructose (C) -0.6 -3.7 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -2.5 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 -2.7 compare
carbon source Cinnamic and Ethanols -0.5 -2.8 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -2.8 compare
carbon source D-Glucose-6-Phosphate (C) -0.5 -3.1 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 -2.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -2.6 compare
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -0.4 -2.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -2.1 compare
carbon source D-Glucuronic Acid (C) -0.4 -2.6 compare
carbon source D-Gluconic Acid (C) -0.4 -2.3 compare
carbon source D-Fructose (C) -0.3 -2.3 compare
carbon source Shikimic Acid 5 mM (C) +0.3 +2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +1.8 compare
soil extract Indole-3-pyruvic 5 mM in soil extract +0.4 +1.9 compare
carbon source Shikimic Acid 5 mM (C) +0.4 +3.0 compare
plant outgrowth control Plant outgrowth control +0.4 +2.5 compare
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +0.5 +3.0 compare