Fitness data for ABIE53_000125 in Paraburkholderia graminis OAS925

two-component system chemotaxis sensor kinase CheA
SEED: Signal transduction histidine kinase CheA (EC 2.7.3.-)
KEGG: two-component system, chemotaxis family, sensor kinase CheA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.8)


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group condition fitness t score  
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -4.6 -3.2 compare
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -4.6 -3.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -4.4 -11.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.7 -12.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -3.0 -13.0 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.4 -7.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.3 -10.1 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.1 -8.7 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -2.0 -7.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.8 -9.0 compare
r2a no shaking R2A no shaking +1.8 +11.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +2.1 +11.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +2.1 +10.4 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +2.2 +8.9 compare
biofilm biofilm; attached cells from 96 well plate assay in R2A +2.4 +17.9 compare
biofilm biofilm; attached cells from 96 well plate assay in R2A +2.5 +17.8 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound +3.0 +22.4 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound +3.1 +23.9 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A +3.3 +23.5 compare
biofilm biofilm; planktonic cells from 96 well plate assay in R2A +3.3 +24.3 compare