Fitness data for ABIE51_RS15400 in Lysobacter sp. OAE881

Trm112 family protein
SEED: FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster

All 143 fitness values, sorted by group and condition


Add gene:

Or see strongest phenotypes or choose conditions

group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -1.0 -1.9 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.5 -1.2 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -1.1 -2.7 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -1.0 -2.8 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.7 -2.1 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -1.7 -4.0 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.2 -0.8 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.3 -0.6 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.5 -1.0 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.3 -0.9 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.2 -0.5 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.3 -0.7 compare
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -1.0 -2.2 compare
Parafilmed volatile R2A agar plate with no fungus -0.5 -1.3 compare
Parafilmed volatile R2A agar plate with no fungus -1.0 -3.0 compare
Parafilmed volatile R2A agar plate with no fungus -0.4 -1.0 compare
Parafilmed volatile R2A agar plate with no fungus -1.4 -2.6 compare
Parafilmed volatile R2A agar plate with no fungus -0.4 -1.3 compare
Parafilmed volatile R2A_HEPES agar plate with no fungus -0.5 -1.5 compare
Parafilmed volatile R2A_HEPES agar plate with no fungus -0.2 -0.5 compare
Parafilmed volatile R2A_HEPES agar plate with no fungus -0.3 -0.7 compare
Parafilmed volatile R2A_HEPES agar plate with no fungus -0.8 -1.6 compare
Parafilmed volatile R2A_HEPES agar plate with no fungus +0.1 +0.3 compare
Parafilmed volatile R2A_HEPES agar plate with no fungus -0.0 -0.0 compare
carbon source 2-Deoxy-D-Ribose (C) -0.8 -1.4 compare
casaminos (C) -0.5 -1.1 compare
casaminos (C) -0.9 -3.2 compare
D-Cellobiose (C) -0.6 -1.5 compare
D-Galactose (C) -0.2 -0.7 compare
D-Galactose (C) -0.4 -1.0 compare
D-Glucose-6-Phosphate (C) -0.1 -0.3 compare
D-Glucose-6-Phosphate (C) -0.0 -0.1 compare
D-Glucuronic Acid (C) -1.1 -2.3 compare
D-Maltose (C) -0.8 -1.9 compare
D-Maltose (C) -0.3 -0.6 compare
Glucuronamide (C) -1.5 -2.5 compare
L-Asparagine (C) +0.4 +0.8 compare
L-Glutamine (C) +0.3 +0.7 compare
L-Malic (C) -1.2 -2.2 compare
L-Tryptophan (C) -0.1 -0.2 compare
L-tyrosine (C) -0.1 -0.3 compare
acetate (C) -0.9 -1.7 compare
acetate (C) +0.3 +0.6 compare
Fumarate (C) +0.0 +0.0 compare
Fumarate (C) +0.4 +1.2 compare
propionate (C) +0.3 +0.6 compare
pyruvate (C) +0.3 +0.6 compare
pyruvate (C) -0.2 -0.5 compare
succinate (C) -0.3 -0.4 compare
Ying_all64 rep A; time point 1 -0.3 -1.0 compare
Ying_all64 rep B; time point 1 -0.0 -0.1 compare
Ying_all64 rep C; time point 1 -0.4 -0.8 compare
Ying_all64 rep A; time point 2 -1.4 -3.7 compare
Ying_all64 rep B; time point 2 -0.8 -2.9 compare
Ying_all64 rep C; time point 2 -1.1 -2.8 compare
Ying_all64 rep A; time point 3 -1.1 -2.4 compare
Ying_all64 rep B; time point 3 -0.3 -0.7 compare
Ying_all64 rep C; time point 3 -0.6 -1.7 compare
Ying_AminoAcid20 rep A; time point 1 -2.0 -3.6 compare
Ying_AminoAcid20 rep B; time point 1 -2.2 -2.9 compare
Ying_AminoAcid20 rep C; time point 1 -3.5 -5.8 compare
Ying_AminoAcid20 rep A; time point 2 -4.5 -4.0 compare
Ying_AminoAcid20 rep B; time point 2 -3.6 -5.1 compare
Ying_AminoAcid20 rep C; time point 2 -6.0 -4.8 compare
Ying_AminoAcid20 rep A; time point 3 -6.8 -4.6 compare
Ying_AminoAcid20 rep B; time point 3 -4.6 -5.3 compare
Ying_AminoAcid20 rep C; time point 3 -3.8 -4.6 compare
Ying_Nucleobase14 rep A; time point 1 +0.3 +0.9 compare
Ying_Nucleobase14 rep B; time point 1 +0.0 +0.1 compare
Ying_Nucleobase14 rep C; time point 1 -0.2 -0.4 compare
Ying_OrganicAcid7 rep A; time point 1 -0.4 -1.4 compare
Ying_OrganicAcid7 rep B; time point 1 -0.2 -0.4 compare
Ying_OrganicAcid7 rep C; time point 1 -0.2 -0.5 compare
Ying_OrganicAcid7 rep A; time point 2 -0.0 -0.1 compare
Ying_OrganicAcid7 rep B; time point 2 -0.5 -1.9 compare
Ying_OrganicAcid7 rep C; time point 2 -0.6 -1.6 compare
Ying_Others16 rep A; time point 1 +0.9 +1.8 compare
Ying_Others16 rep B; time point 1 +0.1 +0.2 compare
Ying_Others16 rep C; time point 1 +0.2 +0.5 compare
Ying_sugar7 rep A; time point 1 -0.7 -1.9 compare
Ying_sugar7 rep C; time point 1 -0.8 -1.6 compare
Ying_sugar7 rep A; time point 2 -0.6 -1.5 compare
Ying_sugar7 rep B; time point 2 -0.8 -2.4 compare
Ying_sugar7 rep C; time point 2 -0.9 -2.5 compare
Ying_sugar7 rep A; time point 3 -0.2 -0.8 compare
Ying_sugar7 rep B; time point 3 -0.7 -1.9 compare
Ying_sugar7 rep C; time point 3 -0.4 -1.1 compare
dmso control DMSO control -1.3 -3.2 compare
DMSO control -1.2 -2.6 compare
DMSO control -1.8 -4.8 compare
DMSO control -1.7 -4.4 compare
r2a no stress control R2A no stress control -1.5 -3.5 compare
R2A no stress control -1.6 -4.4 compare
R2A no stress control -2.7 -4.4 compare
R2A no stress control -1.8 -2.3 compare
stress R2A with 1-octen-3-ol 0.904549 mM -3.4 -6.0 compare
R2A with 1-octen-3-ol 0.904549 mM -2.4 -4.5 compare
R2A with 1-octen-3-ol 0.904549 mM -3.0 -5.7 compare
R2A with 1-octen-3-ol 0.904549 mM -2.9 -5.5 compare
R2A with 1-octen-3-ol 1.08545883333333 mM -2.4 -5.0 compare
R2A with 1-octen-3-ol 1.08545883333333 mM -2.4 -5.0 compare
R2A with 1-octen-3-ol 1.08545883333333 mM -2.4 -5.3 compare
R2A with 1-octen-3-ol 1.08545883333333 mM -3.2 -5.3 compare
R2A with 1-octen-3-ol 1.3568235 mM -2.4 -4.6 compare
R2A with 1-octen-3-ol 1.3568235 mM -1.7 -3.4 compare
R2A with 1-octen-3-ol 1.3568235 mM -2.3 -5.4 compare
R2A with 1-octen-3-ol 1.3568235 mM -3.0 -5.9 compare
R2A with 2-pentyl-furan 10.6842 mM -1.7 -3.4 compare
R2A with 2-pentyl-furan 10.6842 mM -2.1 -4.1 compare
R2A with 2-pentyl-furan 10.6842 mM -2.3 -5.4 compare
R2A with 2-pentyl-furan 10.6842 mM -2.4 -4.7 compare
R2A with 2-pentyl-furan 21.3684 mM -2.4 -2.9 compare
R2A with 2-pentyl-furan 21.3684 mM -3.2 -3.3 compare
R2A with 2-pentyl-furan 21.3684 mM -2.3 -4.8 compare
R2A with 2-pentyl-furan 21.3684 mM -2.3 -4.5 compare
R2A with 2-pentyl-furan 32.0526 mM -2.4 -4.1 compare
R2A with 2-pentyl-furan 32.0526 mM -4.4 -3.3 compare
R2A with 2-pentyl-furan 32.0526 mM -1.8 -2.3 compare
R2A with 2-pentyl-furan 32.0526 mM -2.2 -3.4 compare
R2A with 3-octanone 1.77016666666667 mM -2.5 -5.5 compare
R2A with 3-octanone 1.77016666666667 mM -2.9 -5.3 compare
R2A with 3-octanone 1.77016666666667 mM -2.4 -2.8 compare
R2A with 3-octanone 1.77016666666667 mM -2.9 -5.4 compare
R2A with 3-octanone 2.65516666666667 mM -2.6 -5.7 compare
R2A with 3-octanone 2.65516666666667 mM -3.5 -4.6 compare
R2A with 3-octanone 2.65516666666667 mM -2.8 -5.0 compare
R2A with 3-octanone 2.65516666666667 mM -3.2 -4.1 compare
R2A with 3-octanone 5.31033333333333 mM -3.6 -3.6 compare
R2A with 3-octanone 5.31033333333333 mM -3.2 -4.3 compare
R2A with 3-octanone 5.31033333333333 mM -2.9 -4.5 compare
R2A with 3-octanone 5.31033333333333 mM -3.1 -4.8 compare
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM -3.7 -6.1 compare
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM -3.7 -5.5 compare
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM -2.9 -4.9 compare
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM -2.9 -5.9 compare
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM -3.8 -5.7 compare
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM -3.8 -3.4 compare
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM -3.5 -4.7 compare
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM -4.3 -5.8 compare
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM -2.5 -5.5 compare
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM -3.8 -5.8 compare
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM -2.5 -3.4 compare
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM -2.7 -2.5 compare