Fitness data for BT4716 in Bacteroides thetaiotaomicron VPI-5482

redox-sensitive transcriptional activator (NCBI ptt file)
SEED: Hydrogen peroxide-inducible genes activator
KEGG: LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
survival aerobic shaking 48 hr copy B -1.4 -3.8 compare
mouse_post_colonization Post-colonization (Day 2) - Cage3;Mouse2 -1.2 -3.2 compare
mouse_coculture cage1; mouse2; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.1 -4.4 compare
mouse_coculture cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.1 -4.4 compare
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse3 -1.1 -4.1 compare
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM -1.0 -4.0 compare
carbon source Heparin from porcine intestinal mucosa (C) -1.0 -2.9 compare
phage SJC16_cps8_1MOI -1.0 -3.9 compare
mouse_coculture cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.9 -4.3 compare
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) -0.9 -3.4 compare
mouse_coculture cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.9 -3.5 compare
survival aerobic shaking 48 hr copy A -0.8 -3.3 compare
phage SJC16_cps8_10MOI -0.8 -2.9 compare
phage ARB14_cps1_0.1MOI -0.8 -3.2 compare
stress BHIS with Zinc Pyrithione 0.025 mM -0.8 -3.1 compare
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.0125 mM -0.8 -2.8 compare
mouse_post_colonization Post-colonization (Day 2) - Cage5;Mouse3 -0.7 -3.4 compare
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) -0.7 -2.8 compare
stress BHIS with Paraquat dichloride 0.1 mg/ml -0.7 -2.2 compare
carbon source (+)-Arabinogalactan (C) +0.7 +3.5 compare