Fitness data for BT4652 in Bacteroides thetaiotaomicron VPI-5482

heparan sulfate cleaving enzyme (from data)
Original annotation: conserved hypothetical protein (NCBI ptt file)
SEED: oligo alginate lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)

group	condition	fitness	t score
carbon source	Heparin from porcine intestinal mucosa (C)	-2.8	-13.8	compare
carbon source	Heparin from porcine intestinal mucosa (C)	-2.7	-13.8	compare
stress	BHIS with Vancomycin 0.016 mg/ml	-0.4	-2.3	compare
stress	Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml	-0.4	-2.3	compare
stress	Bile salts 0.5 mg/ml	-0.4	-2.1	compare
carbon source	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (~7.5 mM 3-keto-trehalose) 0.5x (C)	-0.4	-2.3	compare
carbon source	D-Trehalose (C)	-0.4	-2.2	compare
nitrogen source	Casamino Acids (N)	+0.4	+2.3	compare
nitrogen source	D-Glucosamine Hydrochloride (N)	+0.4	+2.7	compare
mouse_coculture	cage1; mouse3; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	+0.4	+2.3	compare
mouse_post_colonization	Post-colonization (Day 1) - Cage6;Mouse1	+0.4	+2.0	compare
mouse_coculture	cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	+0.4	+2.1	compare
mouse_post_colonization	Post-colonization (Day 2) - Cage2;Mouse3	+0.4	+2.3	compare
mouse_post_colonization	Post-colonization (Day 8) - Cage3;Mouse2	+0.4	+2.6	compare
mouse_post_colonization	Post-colonization (Day 1) - Cage3;Mouse1	+0.4	+2.8	compare
stress	Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM	+0.4	+1.8	compare
mouse_coculture	cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	+0.4	+2.4	compare
stress	Varel_Bryant_medium_Glucose with Rifampicin 0.0001953125 mM	+0.4	+2.3	compare
mouse_coculture	cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	+0.4	+2.3	compare
mouse	Post-colonization (Day 7) - Cage1B;Mouse5	+0.6	+3.3	compare