Fitness data for BT4643 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
stress BHIS with Chenodeoxycholic 0.25 mg/ml -1.8 -3.7 compare
mouse; vehicle Stool_Day10_Mouse3 -1.5 -2.8 compare
phage ARB14_cps1_0.1MOI -1.4 -3.2 compare
stress BHIS with Deoxycholic 0.2 mg/ml -1.4 -3.1 compare
mouse; zymosan and vehicle Stool_Day5_Mouse13 -1.3 -3.1 compare
mouse; vehicle Stool_Day10_Mouse4 -1.3 -2.4 compare
stress BHIS with Chenodeoxycholic 0.25 mg/ml -1.3 -1.9 compare
stress BHIS with Lithocholic 0.4 mg/ml -1.2 -3.2 compare
mouse; zymosan and vehicle Stool_Day4_Mouse12 -1.2 -3.3 compare
mouse; vehicle Stool_Day10_Mouse1 -1.2 -2.2 compare
mouse; zymosan and vehicle Stool_Day2_Mouse13 -1.2 -3.4 compare
carbon source D-Trehalose 20mM (C) -1.1 -3.3 compare
carbon source Fructooligosaccharides (FOS) (C) -1.1 -3.7 compare
mouse; vehicle Stool_Day4_Mouse2 -1.1 -3.0 compare
mouse; zymosan and methotrexate Stool_Day8_Mouse18 -1.0 -2.1 compare
mouse; methotrexate Stool_Day7_Mouse9 +1.0 +2.3 compare
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) +1.0 +3.4 compare
stress BHIS with Doxycycline hyclate 0.0001953125 mM +1.1 +2.7 compare
mouse; methotrexate Stool_Day5_Mouse9 +1.1 +2.2 compare
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) +1.3 +2.1 compare