Fitness data for BT4617 in Bacteroides thetaiotaomicron VPI-5482

integrase (NCBI ptt file)
SEED: integrase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
survival aerobic shaking 48 hr copy A -0.7 -2.6 compare
phage DAC16_cps7_10MOI -0.6 -2.9 compare
mouse Post-colonization (Day 7) - Cage1C;Mouse2 -0.6 -2.9 compare
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.2 mM -0.6 -2.6 compare
stress Thallium(I) acetate 0.025 mg/ml -0.5 -2.8 compare
stress BHIS with Thioridazine 0.025 mM -0.5 -2.0 compare
mouse; zymosan and vehicle Stool_Day4_Mouse12 -0.5 -2.6 compare
mouse; methotrexate Stool_Day7_Mouse8 -0.5 -2.2 compare
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 -0.5 -2.3 compare
stress BHIS with Deoxycholic 0.2 mg/ml -0.5 -2.2 compare
mouse; zymosan and vehicle Stool_Day2_Mouse14 -0.5 -2.6 compare
mouse_post_colonization Post-colonization (Day 10) - Cage3;Mouse3 -0.5 -2.5 compare
phage DAC20_cps8_0.1MOI -0.5 -2.4 compare
mouse; methotrexate Stool_Day4_Mouse9 -0.5 -2.1 compare
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -0.5 -2.1 compare
phage HNL05_cps7_0.1MOI +0.5 +1.7 compare
stress BHIS with Trimethoprim 15 uM +0.5 +2.4 compare
stress BHIS with Dimetridazole 0.025 mM +0.5 +2.1 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.5 +2.1 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.6 +1.9 compare