Fitness data for BT4521 in Bacteroides thetaiotaomicron VPI-5482

integrase (NCBI ptt file)
SEED: Integrase/recombinase (XerC/CodV family)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage DAC16_cps7_10MOI -1.0 -2.5 compare
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 -0.9 -2.5 compare
carbon source D-Ribose (C) -0.9 -2.1 compare
mouse_post_colonization Post-colonization (Day 8) - Cage1;Mouse2 -0.7 -2.5 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.7 -2.6 compare
mouse; methotrexate Stool_Day7_Mouse9 +0.6 +1.9 compare
mouse; methotrexate Stool_Day7_Mouse7 +0.6 +2.0 compare
mouse; vehicle Stool_Day7_Mouse2 +0.6 +2.2 compare
mouse_post_colonization Post-colonization (Day 1) - Cage2;Mouse2 +0.7 +1.8 compare
carbon source D-Glucose (C) with L-Arginine +0.7 +2.7 compare
carbon source Pectin +0.7 +2.6 compare
mouse; methotrexate Stool_Day8_Mouse7 +0.7 +2.2 compare
mouse; vehicle Stool_Day8_Mouse4 +0.7 +2.1 compare
carbon source Starch from potato +0.7 +2.7 compare
stress BHIS with Dimethyl Sulfoxide 9 vol% +0.7 +2.0 compare
nitrogen source L-aspartic (N) +0.7 +3.1 compare
stress Varel_Bryant_medium_Glucose with Anhydrotetracycline 0.00078125 mM +0.7 +3.6 compare
stress BHIS with Dimethyl Sulfoxide 9 vol% +0.8 +2.8 compare
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +0.8 +1.7 compare
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +1.2 +2.5 compare