Fitness data for BT4404 in Bacteroides thetaiotaomicron VPI-5482

putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
SEED: SusC, outer membrane protein involved in starch binding

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Mannan from Saccharomyces cerevisiae (C) -0.6 -2.8 compare
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) -0.5 -2.7 compare
carbon source Mannan from Saccharomyces cerevisiae (C) -0.4 -2.0 compare
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) -0.4 -2.3 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen -0.4 -2.6 compare
phage SJC16_cps8_10MOI -0.4 -1.9 compare
mouse; methotrexate Stool_Day5_Mouse9 -0.4 -2.1 compare
mouse_post_colonization Post-colonization (Day 8) - Cage4;Mouse5 +0.4 +2.7 compare
stress BHIS with Rifampicin 0.000048828125 mM +0.4 +2.1 compare
stress Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.1 vol% +0.4 +2.3 compare
mouse; zymosan and vehicle Stool_Day4_Mouse11 +0.4 +2.7 compare
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 +0.4 +1.7 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse1 +0.4 +2.8 compare
stress BHIS with Doxycycline hyclate 0.000390625 mM +0.4 +2.7 compare
mouse; zymosan and vehicle Stool_Day7_Mouse15 +0.5 +3.0 compare
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 +0.5 +2.5 compare
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 +0.5 +3.2 compare
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 +0.5 +3.3 compare
mouse; vehicle Stool_Day6_Mouse5 +0.5 +3.6 compare
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 +0.6 +3.3 compare