Fitness data for BT4402 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
mouse; vehicle Stool_Day6_Mouse5 -1.1 -2.4 compare
mouse; vehicle Stool_Day6_Mouse2 -1.0 -2.3 compare
stress BHIS with Chlorhexidine diacetate salt 0.003125 mM -1.0 -3.0 compare
mouse; zymosan and vehicle Stool_Day7_Mouse11 -1.0 -2.1 compare
mouse Post-colonization (Day 4) - Cage1A;Mouse2 -1.0 -3.8 compare
mouse; zymosan and methotrexate Stool_Day7_Mouse20 -1.0 -2.2 compare
mouse; zymosan and vehicle Stool_Day8_Mouse13 -0.9 -2.2 compare
carbon source Red Arabinan from sugar-beet -0.9 -2.4 compare
carbon source Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C) -0.9 -2.7 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse4 -0.9 -2.7 compare
carbon source amylopectin from maize -0.8 -2.8 compare
stress Varel_Bryant_medium_Glucose with Irgasan 0.025 mM -0.8 -2.8 compare
mouse; methotrexate Stool_Day7_Mouse6 -0.8 -2.0 compare
mouse_post_colonization Post-colonization (Day 2) - Cage1;Mouse3 -0.8 -2.2 compare
mouse Post-colonization (Day 7) - Cage1B;Mouse5 -0.8 -2.1 compare
carbon source Lactulose 20mM (C) -0.8 -2.5 compare
carbon source Hyaluronic from Streptococcus equi -0.8 -2.2 compare
survival aerobic shaking 48 hr copy A +0.9 +3.3 compare
stress BHIS with Cephalothin 0.2 mM +0.9 +1.8 compare
stress BHIS with Simvastatin 30 uM +1.0 +3.3 compare