Fitness data for BT4250 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse4 +0.8 +3.7 compare
mouse_post_colonization Post-colonization (Day 6) - Cage2;Mouse3 +0.8 +4.2 compare
mouse; methotrexate Stool_Day7_Mouse10 +0.8 +3.0 compare
mouse; vehicle Stool_Day10_Mouse1 +0.8 +3.8 compare
mouse_peg_treatment PEG (Day 2) - Cage3;Mouse3 +0.8 +4.1 compare
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 +0.8 +3.6 compare
mouse_post_colonization Post-colonization (Day 8) - Cage3;Mouse4 +0.8 +4.0 compare
mouse_post_colonization Post-colonization (Day 12) - Cage6;Mouse1 +0.8 +4.7 compare
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 +0.8 +4.0 compare
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse2 +0.8 +4.2 compare
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 +0.8 +3.3 compare
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 +0.9 +3.4 compare
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 +0.9 +4.2 compare
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 +0.9 +2.8 compare
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 +0.9 +3.7 compare
mouse; methotrexate Stool_Day12_Mouse8 +0.9 +3.5 compare
mouse; methotrexate Stool_Day8_Mouse10 +0.9 +3.6 compare
mouse_post_colonization Post-colonization (Day 12) - Cage1;Mouse3 +1.0 +5.2 compare
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse3 +1.0 +4.3 compare
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 +1.1 +5.0 compare