Fitness data for BT4247 in Bacteroides thetaiotaomicron VPI-5482

putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
SEED: SusC, outer membrane protein involved in starch binding

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Heparin from porcine intestinal mucosa (C) -0.5 -3.1 compare
carbon source Heparin from porcine intestinal mucosa (C) -0.5 -3.0 compare
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -0.5 -3.3 compare
mouse_coculture cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.5 -3.4 compare
stress BHIS with Cefoxitin 0.0125 mM -0.4 -2.8 compare
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) +0.4 +2.6 compare
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse2 +0.4 +2.9 compare
mouse_peg_treatment PEG (Day 2) - Cage3;Mouse3 +0.4 +2.9 compare
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) +0.4 +2.7 compare
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 +0.4 +2.8 compare
mouse Post-colonization (Day 7) - Cage1C;Mouse2 +0.4 +3.0 compare
mouse_post_colonization Post-colonization (Day 8) - Cage5;Mouse2 +0.4 +3.4 compare
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse3 +0.4 +3.1 compare
mouse_post_colonization Post-colonization (Day 8) - Cage3;Mouse4 +0.5 +3.3 compare
carbon source Mannan from Saccharomyces cerevisiae (C) +0.5 +2.8 compare
mouse_post_colonization Post-colonization (Day 6) - Cage7;Mouse1 +0.5 +3.5 compare
mouse_post_colonization Post-colonization (Day 8) - Cage1;Mouse4 +0.5 +3.7 compare
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 +0.5 +3.5 compare
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse3 +0.6 +4.2 compare
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 +0.7 +4.6 compare