Fitness data for BT3993 in Bacteroides thetaiotaomicron VPI-5482
RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)
Or see all 1021 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| mouse; methotrexate | Stool_Day12_Mouse8 | -1.2 | -3.5 | compare |
| mouse; methotrexate | Stool_Day7_Mouse8 | -0.9 | -3.4 | compare |
| mouse | Post-colonization (Day 7) - Cage1A;Mouse1 | -0.9 | -3.1 | compare |
| mouse; methotrexate | Stool_Day5_Mouse8 | -0.7 | -3.0 | compare |
| mouse; methotrexate | Stool_Day5_Mouse7 | -0.7 | -2.8 | compare |
| mouse; methotrexate | Stool_Day6_Mouse8 | -0.7 | -2.7 | compare |
| mouse | Post-colonization (Day 4) - Cage1A;Mouse3 | -0.7 | -2.7 | compare |
| carbon source | Pectin (C) | -0.6 | -2.6 | compare |
| mouse; zymosan and vehicle | Stool_Day8_Mouse13 | -0.6 | -2.3 | compare |
| mouse | Post-colonization (Day 4) - Cage1B;Mouse5 | -0.6 | -2.2 | compare |
| mouse; zymosan and vehicle | Stool_Day5_Mouse11 | -0.6 | -2.6 | compare |
| nitrogen source | Cytidine (N) | -0.6 | -2.5 | compare |
| mouse; methotrexate | Stool_Day7_Mouse7 | -0.6 | -2.1 | compare |
| carbon source | dextran, Mw ~200,000 (C) | -0.6 | -2.9 | compare |
| mouse | Post-colonization (Day 4) - Cage1C;Mouse3 | -0.6 | -2.4 | compare |
| carbon source | Mannan from Saccharomyces cerevisiae (C) | -0.6 | -1.7 | compare |
| stress | BHIS with Simvastatin 30 uM | +0.6 | +2.2 | compare |
| nitrogen source | L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen | +0.8 | +3.2 | compare |
| carbon source | Hyaluronic from Streptococcus equi | +1.1 | +2.7 | compare |
| carbon source | Hyaluronic from Streptococcus equi | +1.3 | +3.4 | compare |