Fitness data for BT3788 in Bacteroides thetaiotaomicron VPI-5482

TonB-dependent receptor for alpha-mannan (SusC-like) (from data)
Original annotation: putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
SEED: TonB family protein / TonB-dependent receptor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Mannan from Saccharomyces cerevisiae (C) -3.8 -13.6 compare
carbon source Mannan from Saccharomyces cerevisiae (C) -3.7 -14.9 compare
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) -2.4 -11.0 compare
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) -2.4 -10.4 compare
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) -2.2 -11.0 compare
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) -2.2 -10.7 compare
survival aerobic shaking 48 hr copy A +0.4 +3.0 compare
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 +0.5 +3.5 compare
stress BHIS with Chenodeoxycholic 0.25 mg/ml +0.5 +3.6 compare
stress BHIS with Cefoxitin 0.025 mM +0.5 +3.0 compare
stress BHIS with Deoxycholic 0.2 mg/ml +0.5 +3.8 compare
mouse_post_colonization Post-colonization (Day 10) - Cage6;Mouse2 +0.5 +3.7 compare
mouse_post_colonization Post-colonization (Day 12) - Cage6;Mouse1 +0.5 +3.5 compare
stress BHIS with Trimethoprim 0.00625 mM +0.5 +3.2 compare
carbon source D-Ribose (C) +0.5 +3.6 compare
stress BHIS with Trimethoprim 0.00625 mM +0.6 +3.8 compare
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse3 +0.6 +4.3 compare
survival aerobic shaking 48 hr copy B +0.6 +4.4 compare
stress BHIS with Cephalothin 0.625 mg/ml +0.9 +6.7 compare
stress BHIS with Cephalothin 0.625 mg/ml +0.9 +7.1 compare