Fitness data for BT3349 in Bacteroides thetaiotaomicron VPI-5482

chondroitin disaccharide sulfatase (from data)
Original annotation: putative sulfatase yidJ (NCBI ptt file)
SEED: Choline-sulfatase (EC 3.1.6.6)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C) -2.9 -7.6 compare
carbon source Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C) -2.4 -7.9 compare
carbon source Chondroitin sulfate A from bovine trachea (C) -2.4 -7.4 compare
carbon source Chondroitin sulfate A from bovine trachea (C) -2.1 -6.9 compare
stress Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.025 mM -1.0 -4.4 compare
phage DAC15 _cps3_0.1MOI -0.8 -3.5 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.8 -2.4 compare
carbon source Mannan from Saccharomyces cerevisiae (C) -0.8 -1.9 compare
phage SJC12_cps8_0.1MOI -0.8 -2.7 compare
carbon source Mannan from Saccharomyces cerevisiae (C) -0.8 -2.5 compare
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse2 +0.8 +2.5 compare
mouse; vehicle Stool_Day8_Mouse1 +0.8 +1.5 compare
mouse; zymosan and vehicle Stool_Day5_Mouse13 +0.8 +3.4 compare
mouse; zymosan and vehicle Stool_Day10_Mouse13 +0.9 +1.9 compare
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 +0.9 +2.0 compare
mouse; vehicle Stool_Day6_Mouse1 +0.9 +2.4 compare
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 +0.9 +3.6 compare
mouse; vehicle Stool_Day7_Mouse1 +0.9 +2.0 compare
mouse; vehicle Stool_Day10_Mouse1 +1.0 +1.5 compare
mouse_post_colonization Post-colonization (Day 14) - Cage2;Mouse2 +1.2 +2.0 compare