Fitness data for BT3331 in Bacteroides thetaiotaomicron VPI-5482

Outer membrane binding protein for chondroitin sulfate and hyaluronic acid (susD-like) (from data)
Original annotation: putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
SEED: Putative outer membrane protein, probably involved in nutrient binding

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Hyaluronic from Streptococcus equi (C) -3.7 -8.4 compare
carbon source Hyaluronic from Streptococcus equi (C) -3.4 -9.4 compare
carbon source Hyaluronic from Streptococcus equi -3.0 -7.3 compare
carbon source Hyaluronic from Streptococcus equi -2.7 -8.4 compare
carbon source Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C) -2.7 -9.7 compare
carbon source Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C) -2.4 -10.7 compare
carbon source Chondroitin sulfate A from bovine trachea (C) -2.4 -10.5 compare
carbon source Chondroitin sulfate A from bovine trachea (C) -2.1 -10.6 compare
control NoPhage -0.9 -5.1 compare
phage DAC16_cps7_0.1MOI -0.7 -3.7 compare
phage SJC03_cps7_0.1MOI -0.6 -3.8 compare
phage SJC15_cps8_1MOI -0.6 -2.4 compare
phage DAC17_cps3_0.1MOI -0.6 -3.3 compare
mouse_coculture cage1; mouse2; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.6 -3.4 compare
mouse_coculture cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.6 -3.1 compare
mouse_post_colonization Post-colonization (Day 2) - Cage7;Mouse2 -0.6 -3.5 compare
phage DAC20_cps8_0.1MOI -0.6 -3.2 compare
phage DAC15 _cps3_0.1MOI -0.6 -3.2 compare
stress Varel_Bryant_medium_Glucose with Rifampicin 0.0001953125 mM -0.6 -3.4 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.7 +2.9 compare