Fitness data for BT3326 in Bacteroides thetaiotaomicron VPI-5482

putative nifR3 family TIM-barrel enzyme with dihydrouridine synthase domain (NCBI ptt file)
SEED: Probable transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage SJC16_cps8_10MOI -1.4 -2.3 compare
mouse_coculture cage1; mouse3; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.1 -3.4 compare
stress BHIS with Econazole nitrate salt 0.0125 mM -1.1 -2.9 compare
stress Varel_Bryant_medium_Glucose with Geneticin G418 0.2 mM -1.0 -3.3 compare
mouse; methotrexate Stool_Day5_Mouse6 -1.0 -2.6 compare
mouse_recovery_after_peg Post-colonization (Day 1) - Cage2;Mouse5 -1.0 -2.2 compare
stress BHIS with Dimetridazole 0.025 mM -0.9 -2.1 compare
stress BHIS with Cephalothin 0.2 mM -0.9 -1.6 compare
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse4 -0.9 -2.1 compare
mouse; methotrexate Stool_Day4_Mouse9 -0.9 -2.0 compare
mouse; zymosan and methotrexate Stool_Day1_Mouse19 -0.9 -2.6 compare
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 +0.8 +2.3 compare
carbon source Hyaluronic from Streptococcus equi (C) +0.9 +3.3 compare
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) +0.9 +2.9 compare
carbon source Hyaluronic from Streptococcus equi (C) +0.9 +4.0 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.9 +2.8 compare
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse1 +1.0 +3.0 compare
stress Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.1 mM +1.0 +3.1 compare
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse1 +1.0 +3.0 compare
carbon source Red Arabinan from sugar-beet (C) +1.0 +3.4 compare