Fitness data for BT3090 in Bacteroides thetaiotaomicron VPI-5482

TonB-dependent receptor for dextran (SusC-like) (from data)
Original annotation: putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
SEED: SusC, outer membrane protein involved in starch binding

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source dextran, Mw ~200,000 (C) -2.7 -13.8 compare
carbon source dextran, Mw ~200,000 (C) -2.6 -14.9 compare
carbon source dextran, Mw ~200,000; autoclaved 2.5 mg/ml (C) -2.5 -13.4 compare
carbon source dextran, Mw ~200,000; filtered 2.5 mg/ml (C) -2.0 -11.2 compare
carbon source dextran, Mw ~200,000; autoclaved 2.5 mg/ml (C) -1.8 -11.8 compare
carbon source dextran, Mw ~200,000; filtered 2.5 mg/ml (C) -1.6 -10.4 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.8 -5.7 compare
carbon source Red Arabinan from sugar-beet -0.8 -4.8 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.7 -5.3 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.6 -4.3 compare
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) -0.5 -3.6 compare
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) -0.5 -3.3 compare
stress BHIS with Chenodeoxycholic 0.25 mg/ml -0.5 -2.4 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.4 -2.2 compare
stress BHIS with Lithocholic 0.4 mg/ml -0.4 -2.0 compare
stress BHIS with Fusidic 0.004 mg/ml -0.3 -2.3 compare
carbon source Lactulose 20mM (C) +0.4 +2.2 compare
carbon source Mannan from Saccharomyces cerevisiae (C) +0.4 +2.0 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse2 +0.4 +2.5 compare
stress BHIS with Thioridazine 0.025 mM +0.4 +2.0 compare