Fitness data for BT3070 in Bacteroides thetaiotaomicron VPI-5482

Smf protein DNA processing chain A (NCBI ptt file)
SEED: Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake
KEGG: DNA processing protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Starch from potato -0.5 -2.8 compare
stress Varel_Bryant medium with Zinc Pyrithione 0.05 mM -0.5 -3.1 compare
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM -0.5 -2.2 compare
stress Varel_Bryant medium with 8-hydroxy-nitroquinoline 0.01 mM -0.5 -2.5 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse1 -0.5 -2.0 compare
carbon source a-Cyclodextrin (C) -0.4 -2.4 compare
stress Varel_Bryant medium with Chlorhexidine diacetate salt 0.0015 mM -0.4 -2.5 compare
mouse; zymosan and vehicle Stool_Day1_Mouse15 -0.4 -2.3 compare
mouse; methotrexate Stool_Day3_Mouse8 +0.4 +2.3 compare
mouse_post_colonization Post-colonization (Day 2) - Cage3;Mouse2 +0.5 +2.1 compare
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 +0.5 +1.9 compare
mouse; methotrexate Stool_Day7_Mouse9 +0.5 +1.9 compare
carbon source L-Fucose (C) +0.5 +2.5 compare
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 +0.5 +1.7 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.5 +2.3 compare
mouse; methotrexate Stool_Day12_Mouse8 +0.5 +2.4 compare
mouse_post_colonization Post-colonization (Day 10) - Cage7;Mouse2 +0.5 +2.5 compare
phage SJC12_cps8_0.1MOI +0.5 +2.0 compare
control NoPhage +0.6 +3.2 compare
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 +0.7 +2.9 compare