Fitness data for BT3010 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress Varel_Bryant_medium_Glucose with Sulfaquinoxaline 0.2 mM -0.9 -3.5 compare
mouse_post_colonization Post-colonization (Day 2) - Cage2;Mouse3 -0.9 -3.3 compare
stress BHIS with Benzethonium chloride 0.00078125 mM -0.8 -3.4 compare
nitrogen source L-aspartic (N) -0.8 -2.7 compare
stress Varel_Bryant_medium_Glucose with Dimetridazole 0.025 mM -0.8 -3.4 compare
carbon source Red Arabinan from sugar-beet (C) -0.8 -3.0 compare
carbon source Red Arabinan from sugar-beet -0.8 -2.3 compare
nitrogen source L-Valine (N) -0.8 -3.0 compare
stress BHIS with Dimethyl Sulfoxide 0.2 vol% -0.7 -2.9 compare
mouse_coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.7 +2.3 compare
mouse_coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.7 +2.3 compare
stress BHIS with Chlorpromazine 0.1 mM +0.7 +1.7 compare
survival aerobic shaking 48 hr copy B +0.7 +1.6 compare
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse3 +0.7 +3.6 compare
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 +0.7 +2.1 compare
mouse; methotrexate Stool_Day12_Mouse8 +0.7 +3.5 compare
carbon source D-Ribose (C) +0.8 +2.2 compare
stress Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM +0.8 +2.0 compare
stress BHIS with Thioridazine 0.025 mM +0.9 +2.0 compare
phage HNL05_cps7_1MOI +1.0 +2.6 compare