Fitness data for BT2569 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage SJC15_cps8_1MOI -0.9 -2.6 compare
mouse Post-colonization (Day 7) - Cage1A;Mouse1 -0.8 -2.7 compare
mouse_post_colonization Post-colonization (Day 10) - Cage6;Mouse2 -0.8 -2.5 compare
mouse_post_colonization Post-colonization (Day 2) - Cage3;Mouse2 -0.7 -2.8 compare
mouse Post-dosage t1 (Day 1) - Cage1C;Mouse1 -0.7 -1.9 compare
mouse Post-colonization (Day 7) - Cage1C;Mouse2 -0.7 -2.8 compare
mouse Post-colonization (Day 4) - Cage1C;Mouse2 -0.7 -2.1 compare
phage DAC22_cps8_0.1MOI -0.7 -2.6 compare
mouse Post-colonization (Day 7) - Cage1B;Mouse5 -0.7 -2.2 compare
phage DAC23_cps8_10MOI -0.7 -1.8 compare
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.7 +2.4 compare
stress Varel_Bryant_medium_Glucose with Dimetridazole 0.025 mM +0.7 +3.3 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen +0.7 +3.7 compare
stress Bile salts 0.5 mg/ml +0.7 +3.4 compare
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +0.9 +2.9 compare
stress BHIS with Trimethoprim 0.00625 mM +0.9 +2.5 compare
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.9 +3.6 compare
stress BHIS with Thioridazine 0.025 mM +1.1 +3.3 compare
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +1.2 +2.7 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +1.2 +2.7 compare