Fitness data for BT2362 in Bacteroides thetaiotaomicron VPI-5482

putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
SEED: SusC, outer membrane protein involved in starch binding

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Mannan from Saccharomyces cerevisiae (C) -0.4 -2.3 compare
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml -0.4 -2.4 compare
carbon source Mannan from Saccharomyces cerevisiae (C) -0.3 -1.7 compare
stress BHIS with Paraquat dichloride 0.1 mg/ml -0.3 -1.7 compare
stress BHIS with Rifampicin 0.0000244140625 mM -0.3 -2.0 compare
stress BHIS with Paraquat dichloride 0.1 mg/ml -0.3 -1.6 compare
stress BHIS with Chlorhexidine diacetate salt 0.0015625 mM -0.3 -2.0 compare
phage DAC19_cps8_0.1MOI +0.3 +1.7 compare
mouse; methotrexate Stool_Day7_Mouse9 +0.3 +1.7 compare
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (~7.5 mM 3-keto-trehalose) 0.5x (C) +0.3 +2.0 compare
stress BHIS with Oxytetracycline 0.0001953125 mM +0.3 +2.2 compare
mouse_post_colonization Post-colonization (Day 2) - Cage1;Mouse3 +0.3 +2.1 compare
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 +0.3 +1.9 compare
mouse; zymosan and methotrexate Stool_Day5_Mouse16 +0.3 +2.0 compare
stress BHIS with Irgasan 0.0125 mM +0.3 +2.1 compare
carbon source L-Fucose (C) +0.3 +2.3 compare
mouse_post_colonization Post-colonization (Day 14) - Cage4;Mouse4 +0.3 +2.4 compare
stress BHIS with Trimethoprim 0.0125 mM +0.4 +1.8 compare
stress BHIS with Deoxycholic 0.2 mg/ml +0.4 +2.2 compare
stress BHIS with Oxytetracycline 0.000390625 mM +0.4 +2.9 compare