Fitness data for BT2277 in Bacteroides thetaiotaomicron VPI-5482

transposase (NCBI ptt file)
SEED: Integrase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 -0.9 -3.7 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.8 -3.5 compare
stress BHIS with Dimetridazole 0.025 mM -0.7 -2.7 compare
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 -0.6 -2.7 compare
carbon source D-Glucose (C) -0.6 -2.5 compare
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -0.6 -1.8 compare
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 -0.6 -2.3 compare
carbon source Pectin -0.5 -2.0 compare
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 -0.5 -2.1 compare
carbon source D-Glucose (C) with L-Threonine -0.5 -2.2 compare
pH Varel_Bryant_medium_Glucose; pH 6 -0.5 -2.3 compare
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 -0.5 -1.9 compare
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse4 -0.4 -1.9 compare
mouse_post_colonization Post-colonization (Day 14) - Cage4;Mouse4 -0.4 -2.0 compare
stress copper (II) chloride 1 mM +0.4 +2.5 compare
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.4 +2.1 compare
mouse_post_colonization Post-colonization (Day 1) - Cage1;Mouse3 +0.5 +2.7 compare
mouse_post_colonization Post-colonization (Day 3) - Cage3;Mouse3 +0.5 +2.3 compare
nitrogen source Cytidine (N) +0.6 +2.2 compare
phage SJC15_cps8_1MOI +0.8 +3.1 compare