Fitness data for BT1907 in Bacteroides thetaiotaomicron VPI-5482

putative RNA polymerase sigma factor RpoS (NCBI ptt file)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
mouse Post-colonization (Day 7) - Cage1B;Mouse5 -0.7 -3.2 compare
mouse; methotrexate Stool_Day10_Mouse9 -0.7 -3.3 compare
mouse; vehicle Stool_Day10_Mouse3 -0.6 -2.6 compare
mouse; vehicle Stool_Day6_Mouse5 -0.6 -2.9 compare
carbon source Chondroitin sulfate A from bovine trachea (C) -0.6 -3.0 compare
mouse; zymosan and vehicle Stool_Day3_Mouse15 -0.6 -2.8 compare
stress BHIS with Chenodeoxycholic 0.25 mg/ml -0.6 -2.3 compare
carbon source dextran, Mw ~200,000 (C) -0.6 -2.7 compare
mouse; methotrexate Stool_Day10_Mouse10 -0.5 -2.7 compare
mouse; zymosan and vehicle Stool_Day10_Mouse13 -0.5 -2.3 compare
mouse; vehicle Stool_Day6_Mouse3 -0.5 -2.4 compare
mouse; methotrexate Stool_Day12_Mouse8 -0.5 -2.0 compare
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse2 -0.5 -1.8 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.5 -2.7 compare
stress BHIS with Benzethonium chloride 0.002 mM -0.5 -2.8 compare
mouse; methotrexate Stool_Day8_Mouse7 -0.5 -2.6 compare
control NoPhage +0.5 +3.0 compare
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.025 mM +0.6 +3.1 compare
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.1 mM +0.6 +2.8 compare
nitrogen source L-aspartic (N) +0.7 +3.7 compare