Fitness data for BT1468 in Bacteroides thetaiotaomicron VPI-5482

putative outer membrane efflux protein (NCBI ptt file)
SEED: Type I secretion system, outer membrane component LapE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage ARB14_cps1_0.1MOI -1.3 -3.0 compare
mouse Post-colonization (Day 7) - Cage1A;Mouse1 -1.0 -2.9 compare
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse1 -0.9 -3.1 compare
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -0.9 -2.5 compare
stress Varel_Bryant_medium_Glucose with Levofloxacin 0.0015625 mM -0.8 -2.8 compare
phage SJC16_cps8_10MOI -0.8 -2.3 compare
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.8 -2.9 compare
mouse_post_colonization Post-colonization (Day 3) - Cage2;Mouse4 -0.7 -3.0 compare
stress Varel_Bryant medium with Dimethyl Sulfoxide 2 vol% -0.7 -2.9 compare
carbon source Amylose from potato -0.7 -2.6 compare
mouse Post-dosage t1 (Day 1) - Cage1C;Mouse1 -0.7 -2.0 compare
stress BHIS with Thioridazine 0.0125 mM -0.7 -2.5 compare
phage DAC20_cps8_1MOI -0.7 -2.2 compare
stress Varel_Bryant_medium_Glucose with 2-Mercaptopyridine N-oxide 0.1 mM -0.7 -2.5 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.7 +1.9 compare
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 +0.7 +1.9 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.7 +3.4 compare
carbon source D-Trehalose 20mM (C) +0.8 +3.0 compare
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM +1.0 +3.8 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.2 +3.0 compare