Fitness data for BT0306 in Bacteroides thetaiotaomicron VPI-5482

outer membrane protein oprM precursor (NCBI ptt file)
SEED: RND efflux system, outer membrane lipoprotein CmeC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
mouse_post_colonization Post-colonization (Day 2) - Cage5;Mouse1 -1.5 -3.9 compare
mouse Post-colonization (Day 2) - Cage1C;Mouse2 -1.2 -3.8 compare
mouse_post_colonization Post-colonization (Day 3) - Cage5;Mouse1 -1.1 -4.0 compare
carbon source Lactulose 20mM (C) -1.1 -3.3 compare
mouse_post_colonization Post-colonization (Day 10) - Cage2;Mouse1 -1.0 -3.4 compare
mouse_post_colonization Post-colonization (Day 3) - Cage3;Mouse4 -1.0 -3.4 compare
mouse_post_colonization Post-colonization (Day 1) - Cage4;Mouse5 -1.0 -3.2 compare
mouse_post_colonization Post-colonization (Day 4) - Cage6;Mouse1 -1.0 -3.4 compare
mouse Post-colonization (Day 2) - Cage1A;Mouse3 -0.9 -3.4 compare
mouse_post_colonization Post-colonization (Day 1) - Cage7;Mouse2 -0.9 -3.2 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -0.9 -2.6 compare
mouse_post_colonization Post-colonization (Day 4) - Cage5;Mouse5 -0.9 -3.2 compare
mouse Post-dosage t1 (Day 1) - Cage1C;Mouse1 -0.9 -2.2 compare
mouse_coculture cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.9 -2.4 compare
mouse_coculture cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.8 -2.4 compare
stress Varel_Bryant_medium_Glucose with Sulfamonomethoxine 0.2 mM -0.8 -2.4 compare
mouse_coculture cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.8 -3.2 compare
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml +0.9 +2.8 compare
stress BHIS with Dimetridazole 0.00625 mM +0.9 +2.5 compare
phage ARB14_cps1_0.1MOI +0.9 +2.5 compare