Pairwise Alignments

Query, 441 a.a., ABC transporter ATP-binding protein from Rhodanobacter sp. FW510-T8

Subject, 656 a.a., ABC transporter, ATP-binding/permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 48.5 bits (114), Expect = 6e-10
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 2/116 (1%)

Query: 319 LAFAFLAICLFNTVGLLLAKFLRRGGEIGVRRALGASRATVFAQCLVEAGLIGLLGGIGG 378
           +A   L +     + ++L     R  EIGVR A+GA ++ +  Q L+EA L+ L GG  G
Sbjct: 536 IAVISLVVGGIGVMNIMLVSVTERTREIGVRMAVGARQSDILRQFLIEAVLVCLCGGALG 595

Query: 379 WLLTLAGLWLVRRQPAAYADLVHLDAPMFLITFALAIAVSLLAGALPALRASRIAP 434
             L    + +V  Q      +++      +  FA +  + +L G LPA  A+R+ P
Sbjct: 596 VALAYL-IGVVFAQAGGSFQMIY-STTSIVAAFACSTLIGVLFGFLPARNAARLDP 649



 Score = 33.9 bits (76), Expect = 2e-05
 Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 11/194 (5%)

Query: 2   FAYFLDLALRSLKRNKILTVLMVIAIAVGIGASMTTLTVMHLLSGDPLPDKSGKLFYAQV 61
           +A  L +AL ++  +++ T L ++ I +GI AS+ ++  +   S   +      +    +
Sbjct: 258 YAEALKMALLAMSTHRLRTFLTMLGIIIGI-ASVVSVVALGEGSQREILKSISSMGTNTI 316

Query: 62  DAVPDTSYSHTEPQDM--LDYQSAMDLWGAHRADRQALIVDSQLKVHAPGVDLPPLMEMM 119
           D  P   +       +  L    A  L      D     + S + V      +   +   
Sbjct: 317 DIRPGLGFGDRRSARVRTLTASDANALKNLPYVDSVTPSISSSVTVRLGNKAVTASVN-- 374

Query: 120 LSTTADFFPMFEVPFRYGNGWSADDDAKHARVAVISANLNDKLF----GGANSV-GRTLR 174
                +FF +       G  W  D     A+ AVI  N   +LF    G   SV G+ + 
Sbjct: 375 -GVGPEFFRVRGYELAQGQFWDDDSVDALAQDAVIDDNTRKQLFPDSTGAMGSVIGQVIF 433

Query: 175 LKDTDVRIVGVLKP 188
           L D  VRI+GV KP
Sbjct: 434 LGDLPVRIIGVTKP 447