Pairwise Alignments

Query, 353 a.a., flagellar motor protein MotD from Rhodanobacter sp. FW510-T8

Subject, 335 a.a., flagellar motor protein MotD from Rhodanobacter denitrificans MT42

 Score =  519 bits (1336), Expect = e-152
 Identities = 270/334 (80%), Positives = 285/334 (85%), Gaps = 6/334 (1%)

Query: 1   MRRHRHEEHQNHEAWAIPYADLMTLLLAFFVVMYAVSVVNEGKFRVMSESLIEAFNGSSH 60
           MRRH+HEEH NHEAWAIPYADLMTLLLAFFVVMYAVSVVNEGKFRVMSESLIEAFNGSSH
Sbjct: 1   MRRHKHEEHVNHEAWAIPYADLMTLLLAFFVVMYAVSVVNEGKFRVMSESLIEAFNGSSH 60

Query: 61  AIAPLPPTRIRPHNVAPAIAAPAGQSGSSIVPIAVPIPPHPVPASGGSGREAAHRSRPQE 120
           AIAPLPPTRIRPHNVAPAIAAPAGQSGSSIVPIAVPIPPHPVPASGGSGREA H+S+PQE
Sbjct: 61  AIAPLPPTRIRPHNVAPAIAAPAGQSGSSIVPIAVPIPPHPVPASGGSGREAGHQSKPQE 120

Query: 121 ELGRIEDQVRKALQPLIDRKLVVVRHKPDWLEVEIRTDILFPSGVAQLSDPANAVLRDLA 180
            LGRIEDQVRKALQPLIDRKLVVVRHKPDWLE+EIRTDILFPSGVAQLS+PA AVLRDLA
Sbjct: 121 TLGRIEDQVRKALQPLIDRKLVVVRHKPDWLEIEIRTDILFPSGVAQLSEPATAVLRDLA 180

Query: 181 AILARFANQLRVEGFTDDVPINTSLYPSNWELSAARAASVARLFATNGIAPDRLGIIGWG 240
           AILARF N LRVEGFTDD PI+ +LYPSNWELSAARAA VARLF+TNGIAP RLGIIGWG
Sbjct: 181 AILARFGNPLRVEGFTDDKPISNTLYPSNWELSAARAARVARLFSTNGIAPARLGIIGWG 240

Query: 241 EVRPIADNATAEGRNQNRRVLVVVMGNGQAAQRGQSDAGHVDQVSGLVPAPVP--DVLPT 298
           E RPIADNAT EGRNQNRRVLVVVM +   A R  +    V  ++GL  AP P  D+LPT
Sbjct: 241 ETRPIADNATEEGRNQNRRVLVVVMSDHPTAPRDHATPESVGGIAGLAAAPPPAVDILPT 300

Query: 299 VR-VFGSPEAPPAREGDRSAAPTAEVSAGAGRAA 331
           VR V G     P  + D +  P A   AGA R A
Sbjct: 301 VRAVGGGASGQPLPDSDAAVLPHA---AGAARQA 331