Pairwise Alignments

Query, 353 a.a., flagellar motor protein MotD from Rhodanobacter sp. FW510-T8

Subject, 285 a.a., flagellar motor protein MotD from Pseudomonas sp. BP01

 Score =  213 bits (543), Expect = 4e-60
 Identities = 115/268 (42%), Positives = 163/268 (60%), Gaps = 23/268 (8%)

Query: 1   MRRHRH-EEHQNHEAWAIPYADLMTLLLAFFVVMYAVSVVNEGKFRVMSESLIEAFNGSS 59
           MRR RH EEH+NHE W + YAD +TLL AFFVVMY++S +NEGK++V+S++L+  FN   
Sbjct: 1   MRRRRHTEEHENHERWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPE 60

Query: 60  HAIAPLPPTRIRPHNVAPAIAAPAGQSGSSIVPIAVPIPPHPVPASGGSGREAAHRSRPQ 119
            ++ P+P    +P +V PA                      P+        EA   +   
Sbjct: 61  RSMKPIPIGDEQPLSVRPA---------------------EPL-VKDSEQTEAGLAATNV 98

Query: 120 EELGRIEDQVRKALQPLIDRKLVVVRHKPDWLEVEIRTDILFPSGVAQLSDPANAVLRDL 179
           + L  I D VR A   LI+   + VR    W+E+E+ + +LF SG A  SD A A++  +
Sbjct: 99  DPLKTISDDVRDAFGDLINSNQMTVRGNELWIEIELNSSLLFGSGDAMPSDKAFAIIEKV 158

Query: 180 AAILARFANQLRVEGFTDDVPINTSLYPSNWELSAARAASVARLFATNGIAPDRLGIIGW 239
           A I+  FAN + VEGFTD++PI T+ YP+NWELS+ARAAS+ RL A  G+ P R+  +G+
Sbjct: 159 ANIIKPFANPVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRLLAMEGVNPARMASVGY 218

Query: 240 GEVRPIADNATAEGRNQNRRVLVVVMGN 267
           GE +P+A N TAEGR +NRRV++V+  N
Sbjct: 219 GEYQPVAGNDTAEGRARNRRVVLVISRN 246