Pairwise Alignments

Query, 353 a.a., flagellar motor protein MotD from Rhodanobacter sp. FW510-T8

Subject, 321 a.a., flagellar motor protein MotB from Dyella japonica UNC79MFTsu3.2

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 92/330 (27%), Positives = 142/330 (43%), Gaps = 42/330 (12%)

Query: 1   MRRHRHEEHQNHE--AWAIPYADLMTLLLAFFVVMYAVSVVNEGKFRVMSESLIEAFNGS 58
           +RR +   H  H   AW + YAD +T ++AFF+VM+ +      +   +SE         
Sbjct: 12  VRRVKKRGHGGHHGGAWKVAYADFVTAMMAFFLVMWLIGAGTREQRAAISEYFKNP--SM 69

Query: 59  SHAIAPLPPTRIRPHNVAPAIAAPAGQSGSSI-VPIAVPIPPHPVPASGGSG------RE 111
           +   A + P         P    P G S S I +  A  +   P   S G        +E
Sbjct: 70  TQGTATMAP---------PGQTGPGGASTSMIKLGGAKDLSRSPGGKSQGGATASVDPKE 120

Query: 112 AAHRSRPQEELGRIED---------QVRKALQPLIDRKLVVVRHKPDWLEVEI---RTDI 159
               +R QE   R+E+         Q  +AL P  D+ L+ +   P+ L ++I   +   
Sbjct: 121 IEKEARRQER-ARLEELMQQLQAAIQSSQALAPFKDQLLLDIT--PEGLRIQIVDKQNRP 177

Query: 160 LFPSGVAQLSDPANAVLRDLAAILARFANQLRVEGFTDDVPINTSLYPSNWELSAARAAS 219
           +F  G A+L      +L +L+  + R  N++ + G TDD P  +  +  NWELSA RA +
Sbjct: 178 MFDLGSARLRPYTATILEELSGFINRVPNRISLSGHTDDAPYTSDHHYGNWELSADRANA 237

Query: 220 VARLFATNGIAPDRLG-IIGWGEVRPIADNATAEGRNQNRRVLVVVMGNGQAAQRGQSDA 278
             R     G+A D++  ++G     P  D A   G   NRR+ ++VM     A     +A
Sbjct: 238 ARRALLDGGLAEDKIARVVGLAASVPF-DRAN-PGDPINRRISIIVMNKQAEASSLSQEA 295

Query: 279 GHVDQVSGLVPAPVPDVLPTVRVFGSPEAP 308
           G V  +S    A +P V P   V   P AP
Sbjct: 296 GPVVAIS--KEATLPSVAPL--VLAPPSAP 321