Pairwise Alignments

Query, 353 a.a., flagellar motor protein MotD from Rhodanobacter sp. FW510-T8

Subject, 280 a.a., putative flagellar motor protein MotB (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 83.6 bits (205), Expect = 6e-21
 Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 8/154 (5%)

Query: 119 QEELGRIEDQVRKALQPLIDRKL------VVVRHKPDWLEVEIRTDILFPSGVAQLSDPA 172
           Q+ +    ++V++ L  + D  L      + VR K   + V +   +LF SG A+L    
Sbjct: 109 QDMINAQNEKVKQLLNSVKDALLGFSTDELTVREKDGKVYVAMSDKLLFQSGSARLDKRG 168

Query: 173 NAVLRDLAAILARFAN-QLRVEGFTDDVPINTSLYPSNWELSAARAASVARLFATN-GIA 230
              L  LA +L +  +  + +EG TD+ PINT  +  NW+LS  RA SV R+   N G+ 
Sbjct: 169 EEALGKLAEVLNKQTDIDVFIEGHTDNKPINTVQFKDNWDLSVIRATSVVRILIKNYGVN 228

Query: 231 PDRLGIIGWGEVRPIADNATAEGRNQNRRVLVVV 264
           P ++   G GE  P+ DN TAEGR++NRR  +++
Sbjct: 229 PLQIQPSGRGEYMPVDDNETAEGRSKNRRTEIIM 262