Pairwise Alignments

Query, 322 a.a., IS110 family transposase from Rhodanobacter sp. FW510-T8

Subject, 319 a.a., IS110 family transposase from Rhodopseudomonas palustris CGA009

 Score =  125 bits (314), Expect = 1e-33
 Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 10/312 (3%)

Query: 6   VVLGIDVAKAKLDCALSVGSKYRTKVFPNTSPGFARLVAWLLQHEAAHAPVCMEATGIYW 65
           V  G+D  +  LD AL+   +  T   PN + G A ++A L    +    V +EA G Y 
Sbjct: 9   VAAGVDAGQRFLDVALAPSGQ--TFRMPNLAEGIAEIIARL--ERSGVRRVVLEAIGPYA 64

Query: 66  EAAATYLADAGHRVSVINPALAKAHAQSLGLRSKTDVLDAKMLAHFCREKQPPAWVPPPA 125
           E     L+ AG  V ++NP   KA  ++ G R+KTD LDA+++A F           P  
Sbjct: 65  EPLVKALSVAGFEVGIVNPRRIKAFREAEGSRAKTDRLDARLIARFALTMPETLRPLPTD 124

Query: 126 SERRLRALVLRHQALIEMQTQEKNRSESLRED-VRNSVETHLAWLADELKRIEQAIAQLL 184
           ++  L+AL LR + L EM   EK R + +R   + +S    +A L+ + + IE  +A+ +
Sbjct: 125 TQLELKALSLRRRQLTEMIAMEKTRMKQVRGTLLLDSHRAAIAALSAQCQAIEAELAKRI 184

Query: 185 DDDDDLRGQRDLLASIPGLGERTIAVLLAYGVSSERFDTARQFVAFGGLSPRLHESGSSV 244
            DD +LR    +L SIPG+GER +A LL   +        +   +  GL+P + +SG++ 
Sbjct: 185 GDDAELRRVLHILKSIPGIGER-VATLLITDLPELGQRDRKAIASLAGLAPHVSQSGAA- 242

Query: 245 RGRPRLSKV-GHAFLRRALYMPAMVTLYRTAWGQRFRQRLADHGKPPKLIIGAMMRKLAQ 303
              PR +   G   +R ALYM A+V        +     L   GKP K+ + A+ RKL  
Sbjct: 243 --PPRAAIAGGRPCVRAALYMAALVAARHHPKLRDDYNALRLQGKPGKVALIAIARKLLV 300

Query: 304 VAFGVLKSGKPF 315
            A  ++K+  P+
Sbjct: 301 TANALVKADTPY 312