Pairwise Alignments

Query, 157 a.a., Type II secretion system protein H from Rhodanobacter sp. FW510-T8

Subject, 170 a.a., type IV pilus biogenesis protein, putative (RefSeq) from Shewanella loihica PV-4

 Score = 48.1 bits (113), Expect = 7e-11
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 23/164 (14%)

Query: 7   HGFTLVEMLVTLAIFAVLLMIAIPSMRPFLQSQSVKNASMDIVSTVALARSEAIKRNAQV 66
           +GFTL+E++VTLA+  +LL + +PS+    Q+     A   I  T+  AR+ AI    +V
Sbjct: 5   NGFTLIELMVTLAVATILLSVGLPSLTDLYQAYRADAAIKMIQQTLQFARNTAINYGLRV 64

Query: 67  ------DVKATNAADWSQGWVVSQNTPAATIRKQSALGNIVITPSD-----------PSF 109
                 D + TN  DW  G  V   T + T  +      +++  S             S 
Sbjct: 65  TVCPIKDNQCTN--DWHLGLGVF--TDSGTSNQLDGTDKLLMQTSSFDSGDFVYYNRASA 120

Query: 110 SFDGNGRMTTTGATFAIAPINKTGSQPLCLSVTVGATGRVESTK 153
            F  +G  + +  T    P   + + P   +V V   GR+  +K
Sbjct: 121 RFQPDGLASGSNGTLRYCP--GSANSPYSKAVIVNQAGRIRFSK 162